EnhancerDB
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  3. rs180972320[chr1:24623271]
Enhancers that have rs180972320[chr1:24623271]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 24599645 24630859 enh11619
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs180972320[chr1:24623271]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 24623261 24623272 USF1 JASPAR yes 27497506
chr1 24623261 24623272 USF2 JASPAR yes 27497507
chr1 24623262 24623272 SREBF2 JASPAR yes 27497508
chr1 24623267 24623280 NR2F1 JASPAR yes 27497510
chr1 24623268 24623276 CREB1 JASPAR yes 27497511
chr1 24623269 24623287 RARA JASPAR yes 27497512
chr1 24623271 24623275 ESR1 TRANSFAC yes 27497513
Genes associated with rs180972320[chr1:24623271], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More