EnhancerDB
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  3. rs180987095[chr1:23445725]
Enhancers that have rs180987095[chr1:23445725]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23435285 23459230 enh11606
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Ovary Thyroid Neural Stem Cells (H9) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Heart
chr1 23445594 23445963 vista732
VISTA
Transcript factors that have rs180987095[chr1:23445725]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23445718 23445728 HOXC10 JASPAR yes 27414744
chr1 23445718 23445728 HOXD11 JASPAR yes 27414745
chr1 23445718 23445728 HOXC10 JASPAR yes 118248868
chr1 23445718 23445728 HOXD11 JASPAR yes 118248869
chr1 23445718 23445729 HOXC11 JASPAR yes 27414746
chr1 23445718 23445729 HOXC12 JASPAR yes 27414747
chr1 23445718 23445729 HOXC13 JASPAR yes 27414748
chr1 23445718 23445729 HOXD12 JASPAR yes 27414749
chr1 23445718 23445729 HOXC11 JASPAR yes 118248870
chr1 23445718 23445729 HOXC12 JASPAR yes 118248871
chr1 23445718 23445729 HOXC13 JASPAR yes 118248872
chr1 23445718 23445729 HOXD12 JASPAR yes 118248873
chr1 23445719 23445739 TBX19 JASPAR yes 27414750
chr1 23445719 23445739 TBX19 JASPAR yes 118248874
chr1 23445725 23445743 TP63 JASPAR yes 27414752
chr1 23445725 23445743 TP63 JASPAR yes 118248876
Genes associated with rs180987095[chr1:23445725], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More