EnhancerDB
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  3. rs181149878[chr12:116960000]
Enhancers that have rs181149878[chr12:116960000]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 116953469 116985255 enh30011
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs181149878[chr12:116960000]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 116959710 116960734 ZNF274 GTRD no Blood (GM12878) 21577187
chr12 116959765 116960375 ZBTB33 GTRD no Brain (SK-N-SH) 21577188
chr12 116959782 116960355 ZBTB33 GTRD no Brain (SK-N-SH) 21577189
chr12 116959782 116960361 ZBTB33 GTRD no Brain (SK-N-SH) 21577190
chr12 116959834 116960857 ZNF274 GTRD no Blood (GM12878) 21577191
chr12 116959845 116960433 ZBTB33 GTRD no Brain (SK-N-SH) 21577192
chr12 116959862 116960253 ZBTB33 GTRD no Brain (SK-N-SH) 21577193
chr12 116959883 116960956 ZNF274 GTRD no Blood (GM12878) 21577194
chr12 116959916 116960718 ZNF274 GTRD no Blood (GM12878) 21577195
chr12 116959916 116960964 ZNF274 GTRD no Blood (GM12878) 21577196
chr12 116959919 116960726 ZNF274 GTRD no Blood (GM12878) 21577197
chr12 116959931 116960756 ZNF274 GTRD no Blood (GM12878) 21577198
chr12 116959944 116960548 ZNF274 GTRD no Blood (GM12878) 21577199
chr12 116959962 116960579 ZNF274 GTRD no Blood (GM12878) 21577200
chr12 116959970 116960651 ZNF274 GTRD no Blood (GM12878) 21577201
chr12 116959990 116960522 ZNF274 GTRD no Blood (GM12878) 21577202
chr12 116959992 116960007 MEF2C JASPAR yes 124005983
chr12 116959992 116960013 IRF1 JASPAR yes 124005984
chr12 116959993 116960008 MEF2A JASPAR yes 124005985
chr12 116959995 116960009 IRF7 JASPAR yes 124005986
chr12 116959997 116960009 IRF1 JASPAR yes 124005987
chr12 116959998 116960013 FOXP1 JASPAR yes 124005988
chr12 116959998 116960013 MEF2C JASPAR yes 124005989
chr12 116959998 116960019 IRF1 JASPAR yes 124005990
chr12 116959999 116960014 MEF2A JASPAR yes 124005991
chr12 116960000 116960012 FOXC2 JASPAR yes 124005992
chr12 116960000 116960012 MEF2A JASPAR yes 124005993
chr12 116960000 116960012 MEF2B JASPAR yes 124005994
chr12 116960000 116960012 MEF2D JASPAR yes 124005995
Genes associated with rs181149878[chr12:116960000], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More