EnhancerDB
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  3. rs181368187[chr1:19795175]
Enhancers that have rs181368187[chr1:19795175]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 19794978 19795283 vista616
VISTA
Transcript factors that have rs181368187[chr1:19795175]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19795164 19795177 SMAD2 JASPAR yes 27194764
chr1 19795164 19795177 SMAD2 JASPAR yes 118243499
chr1 19795166 19795177 E2F6 JASPAR yes 27194765
chr1 19795166 19795177 E2F6 JASPAR yes 118243500
chr1 19795173 19795185 NHLH1 JASPAR yes 27194766
chr1 19795173 19795185 NHLH1 JASPAR yes 118243501
chr1 19795174 19795184 NHLH1 JASPAR yes 27194767
chr1 19795174 19795184 NHLH1 JASPAR yes 118243502
Genes associated with rs181368187[chr1:19795175], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More