EnhancerDB
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  3. rs181679865[chr12:46824020]
Enhancers that have rs181679865[chr12:46824020]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46820955 46858735 enh14676
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs181679865[chr12:46824020]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46823765 46825133 ZBTB33 GTRD no Brain (SK-N-SH) 108027118
chr12 46823893 46824212 ZNF274 GTRD no Cervix (HeLa-S3) 21541465
chr12 46823893 46824212 ZNF274 GTRD no Cervix (HeLa-S3) 108027119
chr12 46823995 46824360 ZBTB33 GTRD no Brain (SK-N-SH) 108027120
chr12 46824005 46824621 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21541466
chr12 46824005 46824621 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108027121
chr12 46824010 46824022 POU2F1 JASPAR yes 120619069
chr12 46824010 46824023 POU3F3 JASPAR yes 120619070
chr12 46824010 46824024 POU1F1 JASPAR yes 120619071
chr12 46824011 46824023 POU3F1 JASPAR yes 120619072
chr12 46824011 46824023 POU3F2 JASPAR yes 120619073
chr12 46824012 46824021 POU3F4 JASPAR yes 120619074
chr12 46824012 46824021 POU5F1B JASPAR yes 120619075
chr12 46824015 46824026 HOXA10 JASPAR yes 120619076
chr12 46824016 46824025 CDX1 JASPAR yes 120619077
chr12 46824016 46824026 HOXA13 JASPAR yes 120619078
chr12 46824016 46824026 HOXB13 JASPAR yes 120619079
chr12 46824016 46824026 HOXD13 JASPAR yes 120619080
chr12 46824016 46824032 POU4F2 JASPAR yes 120619081
chr12 46824016 46824032 POU4F3 JASPAR yes 120619082
chr12 46824018 46824032 POU4F1 JASPAR yes 120619083
chr12 46824019 46824033 POU4F1 JASPAR yes 120619084
Genes associated with rs181679865[chr12:46824020], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More