EnhancerDB
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  3. rs1820506[chr15:42207555]
Enhancers that have rs1820506[chr15:42207555]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 42202285 42235244 enh3549
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs1820506[chr15:42207555]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 42207546 42207559 ZBTB18 JASPAR yes 23004447
chr15 42207547 42207559 PKNOX1 JASPAR yes 23004448
chr15 42207547 42207559 TGIF1 JASPAR yes 23004449
chr15 42207548 42207557 SNAI2 JASPAR yes 23004450
chr15 42207548 42207558 FIGLA JASPAR yes 23004451
chr15 42207548 42207558 ID4 JASPAR yes 23004452
chr15 42207548 42207558 TCF3 JASPAR yes 23004453
chr15 42207548 42207558 TCF4 JASPAR yes 23004454
chr15 42207550 42207559 ZEB1 JASPAR yes 23004455
chr15 42207550 42207560 TBX21 JASPAR yes 23004456
chr15 42207551 42207559 MGA JASPAR yes 23004457
chr15 42207551 42207559 TBX15 JASPAR yes 23004458
chr15 42207551 42207559 TBX1 JASPAR yes 23004459
chr15 42207551 42207559 TBX4 JASPAR yes 23004460
chr15 42207551 42207559 TBX5 JASPAR yes 23004461
chr15 42207551 42207561 TBR1 JASPAR yes 23004462
chr15 42207551 42207564 SMAD2 JASPAR yes 23004463
chr15 42207555 42207566 FOSL2 JASPAR yes 23004464
Genes associated with rs1820506[chr15:42207555], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More