EnhancerDB
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  3. rs182254222[chr12:116960726]
Enhancers that have rs182254222[chr12:116960726]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 116953469 116985255 enh30011
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs182254222[chr12:116960726]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 116959710 116960734 ZNF274 GTRD no Blood (GM12878) 21577187
chr12 116959834 116960857 ZNF274 GTRD no Blood (GM12878) 21577191
chr12 116959883 116960956 ZNF274 GTRD no Blood (GM12878) 21577194
chr12 116959916 116960964 ZNF274 GTRD no Blood (GM12878) 21577196
chr12 116959919 116960726 ZNF274 GTRD no Blood (GM12878) 21577197
chr12 116959931 116960756 ZNF274 GTRD no Blood (GM12878) 21577198
chr12 116960065 116960801 ZNF274 GTRD no Blood (GM12878) 21577207
chr12 116960724 116960730 ZNF354C JASPAR yes 124006129
chr12 116960725 116960735 ID4 JASPAR yes 124006130
chr12 116960726 116960735 SNAI2 JASPAR yes 124006131
Genes associated with rs182254222[chr12:116960726], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More