EnhancerDB
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  3. rs1822741[chr12:46613097]
Enhancers that have rs1822741[chr12:46613097]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46599536 46618695 enh2312
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (A673) Heart
Transcript factors that have rs1822741[chr12:46613097]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46613092 46613113 IRF1 JASPAR yes 120604865
chr12 46613094 46613109 STAT2 JASPAR yes 120604866
chr12 46613095 46613109 STAT1 JASPAR yes 120604867
chr12 46613096 46613108 IRF1 JASPAR yes 120604868
chr12 46613096 46613110 IRF7 JASPAR yes 120604869
chr12 46613096 46613110 IRF8 JASPAR yes 120604870
chr12 46613096 46613111 IRF9 JASPAR yes 120604871
Genes associated with rs1822741[chr12:46613097], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More