EnhancerDB
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  3. rs182279180[chr1:39657067]
Enhancers that have rs182279180[chr1:39657067]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39647111 39665522 enh11761
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs182279180[chr1:39657067]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39657053 39657068 FOXA1 JASPAR yes 28265169
chr1 39657055 39657067 FOXC2 JASPAR yes 28265170
chr1 39657057 39657068 FOXA1 JASPAR yes 28265171
chr1 39657066 39657069 MYB TRANSFAC yes 28265172
Genes associated with rs182279180[chr1:39657067], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More