EnhancerDB
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  3. rs182449143[chr17:2129928]
Enhancers that have rs182449143[chr17:2129928]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2090104 2130255 enh4208
Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs182449143[chr17:2129928]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2129920 2129930 TBR1 JASPAR yes 52740158
chr17 2129921 2129931 TBX21 JASPAR yes 52740159
chr17 2129922 2129930 MGA JASPAR yes 52740160
chr17 2129922 2129930 TBX15 JASPAR yes 52740161
chr17 2129922 2129930 TBX1 JASPAR yes 52740162
chr17 2129922 2129930 TBX4 JASPAR yes 52740163
chr17 2129922 2129930 TBX5 JASPAR yes 52740164
chr17 2129922 2129931 ZEB1 JASPAR yes 52740165
chr17 2129922 2129934 PKNOX1 JASPAR yes 52740166
chr17 2129922 2129934 TGIF1 JASPAR yes 52740167
chr17 2129922 2129935 ZBTB18 JASPAR yes 52740168
chr17 2129923 2129933 FIGLA JASPAR yes 52740169
chr17 2129923 2129933 ID4 JASPAR yes 52740170
chr17 2129923 2129933 TCF3 JASPAR yes 52740171
chr17 2129923 2129933 TCF4 JASPAR yes 52740172
chr17 2129924 2129933 SNAI2 JASPAR yes 52740173
chr17 2129925 2129930 USF2 TRANSFAC yes 52740174
Genes associated with rs182449143[chr17:2129928], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More