EnhancerDB
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  3. rs182495978[chr1:171391566]
Enhancers that have rs182495978[chr1:171391566]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 171385965 171412775 enh12367
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs182495978[chr1:171391566]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 171391556 171391568 MEF2D JASPAR yes 33078716
chr1 171391558 171391573 FOXP1 JASPAR yes 33078717
chr1 171391559 171391580 IRF1 JASPAR yes 33078718
chr1 171391560 171391575 FOXP1 JASPAR yes 33078719
chr1 171391560 171391575 MEF2C JASPAR yes 33078720
chr1 171391560 171391581 IRF1 JASPAR yes 33078721
chr1 171391564 171391570 TBP TRANSFAC yes 33078722
chr1 171391565 171391580 FOXP1 JASPAR yes 33078723
chr1 171391565 171391586 IRF1 JASPAR yes 33078724
Genes associated with rs182495978[chr1:171391566], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More