EnhancerDB
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  3. rs182508889[chr6:88440918]
Enhancers that have rs182508889[chr6:88440918]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 88422133 88444375 enh23401
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs182508889[chr6:88440918]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 88440909 88440930 IRF1 JASPAR yes 103326259
chr6 88440912 88440926 SPIC JASPAR yes 103326260
chr6 88440912 88440926 STAT1 JASPAR yes 103326261
chr6 88440916 88440931 MEF2C JASPAR yes 103326262
Genes associated with rs182508889[chr6:88440918], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More