EnhancerDB
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  3. rs182563407[chr5:159598171]
Enhancers that have rs182563407[chr5:159598171]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 159580425 159605208 enh22765
Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs182563407[chr5:159598171]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 159598155 159598176 IRF1 JASPAR yes 67346176
chr5 159598157 159598172 PRDM1 JASPAR yes 67346177
chr5 159598157 159598178 IRF1 JASPAR yes 67346178
chr5 159598159 159598180 IRF1 JASPAR yes 67346179
chr5 159598161 159598182 IRF1 JASPAR yes 67346180
chr5 159598162 159598177 FOXP1 JASPAR yes 67346181
chr5 159598164 159598179 FOXP1 JASPAR yes 67346182
chr5 159598166 159598181 FOXP1 JASPAR yes 67346183
chr5 159598166 159598187 IRF1 JASPAR yes 67346184
chr5 159598168 159598183 FOXP1 JASPAR yes 67346185
chr5 159598171 159598186 MEF2A JASPAR yes 67346186
Genes associated with rs182563407[chr5:159598171], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More