EnhancerDB
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  3. rs182574406[chr1:27780548]
Enhancers that have rs182574406[chr1:27780548]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27742945 27784244 enh174
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs182574406[chr1:27780548]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27780545 27780549 NFE TRANSFAC yes 27696346
chr1 27780545 27780550 GATA1 TRANSFAC yes 27696347
chr1 27780545 27780551 GATA3 JASPAR yes 27696348
Genes associated with rs182574406[chr1:27780548], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More