EnhancerDB
  1. Home
  2. SNP
  3. rs182609617[chr5:77905342]
Enhancers that have rs182609617[chr5:77905342]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 77878525 77914000 enh48956
Brain (SK-N-MC) Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs182609617[chr5:77905342]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 77905335 77905344 SOX9 JASPAR yes 63606160
chr5 77905339 77905349 NFATC3 JASPAR yes 63606161
Genes associated with rs182609617[chr5:77905342], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More