EnhancerDB
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  3. rs182828652[chr17:43379352]
Enhancers that have rs182828652[chr17:43379352]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 43363305 43400878 enh4428
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs182828652[chr17:43379352]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 43378661 43379470 TCF7L2 GTRD no Colon (HCT116) 21764235
chr17 43378948 43379468 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21764240
chr17 43379015 43379611 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21764241
chr17 43379034 43379630 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21764242
chr17 43379096 43379426 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21764243
chr17 43379132 43379412 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21764245
chr17 43379174 43379484 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21764246
chr17 43379197 43379525 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21764247
chr17 43379238 43379502 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21764248
chr17 43379330 43379396 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21764249
chr17 43379347 43379366 PAX5 JASPAR yes 54441528
Genes associated with rs182828652[chr17:43379352], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More