EnhancerDB
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  3. rs182960001[chr1:230248248]
Enhancers that have rs182960001[chr1:230248248]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 230237385 230313644 enh12770
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 230248068 230248475 vista5491
VISTA
Transcript factors that have rs182960001[chr1:230248248]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 230247926 230248296 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21391451
chr1 230247926 230248296 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107878667
chr1 230248190 230248476 ZBTB33 GTRD no Lung (A549) 21391452
chr1 230248190 230248476 ZBTB33 GTRD no Lung (A549) 107878668
chr1 230248238 230248250 NHLH1 JASPAR yes 36021974
chr1 230248238 230248250 NHLH1 JASPAR yes 118477572
chr1 230248238 230248251 ZBTB18 JASPAR yes 36021975
chr1 230248238 230248251 ZBTB18 JASPAR yes 118477573
chr1 230248239 230248249 FIGLA JASPAR yes 36021976
chr1 230248239 230248249 MSC JASPAR yes 36021977
chr1 230248239 230248249 TFAP4 JASPAR yes 36021978
chr1 230248239 230248249 FIGLA JASPAR yes 118477574
chr1 230248239 230248249 MSC JASPAR yes 118477575
chr1 230248239 230248249 TFAP4 JASPAR yes 118477576
chr1 230248239 230248251 TAL1 JASPAR yes 36021979
chr1 230248239 230248251 TAL1 JASPAR yes 118477577
Genes associated with rs182960001[chr1:230248248], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More