EnhancerDB
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  3. rs182990371[chr5:172278438]
Enhancers that have rs182990371[chr5:172278438]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172258805 172341224 enh22817
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs182990371[chr5:172278438]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172278432 172278444 TFAP2A JASPAR yes 67834721
chr5 172278432 172278444 TFAP2B JASPAR yes 67834722
chr5 172278432 172278444 TFAP2C JASPAR yes 67834723
chr5 172278433 172278444 TFAP2B JASPAR yes 67834724
Genes associated with rs182990371[chr5:172278438], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More