EnhancerDB
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  3. rs183057411[chr6:108909817]
Enhancers that have rs183057411[chr6:108909817]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 108896085 108921787 enh23478
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr6 108909808 108911282 vista1486
VISTA
Transcript factors that have rs183057411[chr6:108909817]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 108909808 108909821 TFAP2A JASPAR yes 22274419
chr6 108909808 108909821 TFAP2B JASPAR yes 22274420
chr6 108909808 108909821 TFAP2A JASPAR yes 104180800
chr6 108909808 108909821 TFAP2B JASPAR yes 104180801
chr6 108909814 108909828 NR2F1 JASPAR yes 22274421
chr6 108909814 108909828 NR2F1 JASPAR yes 104180802
Genes associated with rs183057411[chr6:108909817], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More