EnhancerDB
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  3. rs183097884[chr1:19773232]
Enhancers that have rs183097884[chr1:19773232]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs183097884[chr1:19773232]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19773222 19773232 POU6F2 JASPAR yes 27191424
chr1 19773224 19773232 HOXA5 JASPAR yes 27191425
chr1 19773226 19773247 IRF1 JASPAR yes 27191426
chr1 19773228 19773243 IRF9 JASPAR yes 27191427
chr1 19773229 19773243 IRF7 JASPAR yes 27191428
Genes associated with rs183097884[chr1:19773232], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More