EnhancerDB
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  3. rs183127540[chr12:122603413]
Enhancers that have rs183127540[chr12:122603413]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122578829 122604895 enh2657
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs183127540[chr12:122603413]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122603399 122603413 ONECUT2 JASPAR yes 124268537
chr12 122603399 122603413 ONECUT3 JASPAR yes 124268538
chr12 122603402 122603423 IRF1 JASPAR yes 124268539
chr12 122603406 122603417 CDX2 JASPAR yes 124268540
chr12 122603407 122603418 HOXA10 JASPAR yes 124268541
chr12 122603408 122603417 CDX1 JASPAR yes 124268542
chr12 122603408 122603418 HOXA13 JASPAR yes 124268543
chr12 122603408 122603418 HOXB13 JASPAR yes 124268544
chr12 122603408 122603418 HOXD13 JASPAR yes 124268545
chr12 122603408 122603423 FOXP1 JASPAR yes 124268546
chr12 122603408 122603423 MEF2C JASPAR yes 124268547
chr12 122603408 122603429 IRF1 JASPAR yes 124268548
chr12 122603409 122603424 MEF2A JASPAR yes 124268549
chr12 122603410 122603422 FOXC2 JASPAR yes 124268550
chr12 122603410 122603422 MEF2A JASPAR yes 124268551
chr12 122603410 122603422 MEF2B JASPAR yes 124268552
chr12 122603410 122603422 MEF2D JASPAR yes 124268553
chr12 122603411 122603421 MEF2A JASPAR yes 124268554
chr12 122603412 122603427 FOXP1 JASPAR yes 124268555
Genes associated with rs183127540[chr12:122603413], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More