EnhancerDB
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  3. rs183353870[chr5:172279269]
Enhancers that have rs183353870[chr5:172279269]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172258805 172341224 enh22817
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs183353870[chr5:172279269]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172279258 172279276 IRF2 JASPAR yes 67834807
chr5 172279263 172279275 IRF1 JASPAR yes 67834808
chr5 172279263 172279277 IRF7 JASPAR yes 67834809
Genes associated with rs183353870[chr5:172279269], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More