EnhancerDB
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  3. rs183389548[chr17:872109]
Enhancers that have rs183389548[chr17:872109]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 845785 881195 enh32038
Astrocyte Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs183389548[chr17:872109]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 872020 872453 TCF7L2 GTRD no Colon (HCT116) 21739051
chr17 872020 872453 TCF7L2 GTRD no Colon (HCT116) 108227849
chr17 872080 872543 TCF7L2 GTRD no Colon (HCT116) 21739052
chr17 872080 872543 TCF7L2 GTRD no Colon (HCT116) 108227850
chr17 872101 872116 HNF4G JASPAR yes 52647043
chr17 872102 872116 NR2F1 JASPAR yes 52647044
chr17 872102 872116 RXRB JASPAR yes 52647045
chr17 872102 872116 RXRG JASPAR yes 52647046
chr17 872102 872117 HNF4A JASPAR yes 52647047
chr17 872105 872125 ESR1 JASPAR yes 52647048
chr17 872107 872120 NR2F1 JASPAR yes 52647049
chr17 872108 872126 ESR2 JASPAR yes 52647050
chr17 872109 872117 NR4A2 JASPAR yes 52647051
chr17 872109 872126 ESR1 JASPAR yes 52647052
chr17 872109 872127 ESR1 JASPAR yes 52647053
chr17 872109 872127 ESR2 JASPAR yes 52647054
Genes associated with rs183389548[chr17:872109], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More