EnhancerDB
  1. Home
  2. SNP
  3. rs183656538[chr17:48967794]
Enhancers that have rs183656538[chr17:48967794]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48954425 48973436 enh32228
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs183656538[chr17:48967794]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48967328 48968125 TCF7L2 GTRD no Colon (HCT116) 21770279
chr17 48967783 48967801 NFYA JASPAR yes 54729681
chr17 48967786 48967802 NFYA JASPAR yes 54729682
chr17 48967788 48967798 EMX2 JASPAR yes 54729683
chr17 48967788 48967798 EN2 JASPAR yes 54729684
chr17 48967788 48967798 ESX1 JASPAR yes 54729685
chr17 48967788 48967798 GBX1 JASPAR yes 54729686
chr17 48967788 48967798 GBX2 JASPAR yes 54729687
chr17 48967788 48967798 HESX1 JASPAR yes 54729688
chr17 48967788 48967798 LBX2 JASPAR yes 54729689
chr17 48967788 48967798 LHX2 JASPAR yes 54729690
chr17 48967788 48967798 RAX JASPAR yes 54729691
chr17 48967789 48967797 BARX1 JASPAR yes 54729692
chr17 48967789 48967797 BSX JASPAR yes 54729693
chr17 48967789 48967797 EN1 JASPAR yes 54729694
chr17 48967789 48967797 ISX JASPAR yes 54729695
chr17 48967789 48967797 LHX9 JASPAR yes 54729696
chr17 48967789 48967797 MSX1 JASPAR yes 54729697
chr17 48967789 48967797 MSX2 JASPAR yes 54729698
chr17 48967789 48967797 PRRX1 JASPAR yes 54729699
chr17 48967789 48967797 RAX2 JASPAR yes 54729700
chr17 48967789 48967797 SHOX JASPAR yes 54729701
chr17 48967789 48967804 NFYB JASPAR yes 54729702
Genes associated with rs183656538[chr17:48967794], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More