EnhancerDB
  1. Home
  2. SNP
  3. rs184002824[chr1:226842252]
Enhancers that have rs184002824[chr1:226842252]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226838901 226907579 enh973
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 226842095 226842563 vista5364
VISTA
Transcript factors that have rs184002824[chr1:226842252]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226841722 226842358 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21387037
chr1 226841722 226842358 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107875895
chr1 226841722 226842358 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107875896
chr1 226841722 226842358 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107875897
chr1 226842235 226842501 ZNF274 GTRD no Blood (GM12878) 21387042
chr1 226842235 226842501 ZNF274 GTRD no Blood (GM12878) 107875905
chr1 226842248 226842259 CDX2 JASPAR yes 35828090
chr1 226842248 226842259 CDX2 JASPAR yes 118471421
chr1 226842249 226842260 HOXA10 JASPAR yes 35828091
chr1 226842249 226842260 HOXD12 JASPAR yes 35828092
chr1 226842249 226842260 HOXA10 JASPAR yes 118471422
chr1 226842249 226842260 HOXD12 JASPAR yes 118471423
chr1 226842250 226842259 CDX1 JASPAR yes 35828093
chr1 226842250 226842259 CDX1 JASPAR yes 118471424
chr1 226842250 226842260 HOXA13 JASPAR yes 35828094
chr1 226842250 226842260 HOXB13 JASPAR yes 35828095
chr1 226842250 226842260 HOXD13 JASPAR yes 35828096
chr1 226842250 226842260 HOXA13 JASPAR yes 118471425
chr1 226842250 226842260 HOXB13 JASPAR yes 118471426
chr1 226842250 226842260 HOXD13 JASPAR yes 118471427
Genes associated with rs184002824[chr1:226842252], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More