EnhancerDB
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  3. rs184006021[chr1:27748346]
Enhancers that have rs184006021[chr1:27748346]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27742945 27784244 enh174
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs184006021[chr1:27748346]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27748346 27748358 PKNOX1 JASPAR yes 27691840
chr1 27748346 27748358 TGIF1 JASPAR yes 27691841
chr1 27748346 27748358 TGIF2 JASPAR yes 27691842
Genes associated with rs184006021[chr1:27748346], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More