EnhancerDB
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  3. rs1843317[chr12:53958085]
Enhancers that have rs1843317[chr12:53958085]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53952154 53966435 enh2368
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Uterus Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs1843317[chr12:53958085]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53958079 53958092 ELF1 JASPAR yes 120991392
chr12 53958080 53958092 EHF JASPAR yes 120991393
chr12 53958080 53958092 ELF1 JASPAR yes 120991394
chr12 53958080 53958092 ELF4 JASPAR yes 120991395
chr12 53958080 53958093 ELF3 JASPAR yes 120991396
chr12 53958081 53958092 ELF5 JASPAR yes 120991397
chr12 53958082 53958089 ETS1 TRANSFAC yes 120991398
chr12 53958082 53958092 ETV6 JASPAR yes 120991399
chr12 53958082 53958092 GABPA JASPAR yes 120991400
chr12 53958082 53958093 ELK4 JASPAR yes 120991401
chr12 53958082 53958093 FLI1 JASPAR yes 120991402
chr12 53958083 53958091 EHF JASPAR yes 120991403
chr12 53958083 53958091 FEV JASPAR yes 120991404
chr12 53958084 53958091 SPI1 JASPAR yes 120991405
Genes associated with rs1843317[chr12:53958085], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More