EnhancerDB
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  3. rs184480350[chr1:19798129]
Enhancers that have rs184480350[chr1:19798129]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs184480350[chr1:19798129]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19798117 19798132 NR2C2 JASPAR yes 27195167
chr1 19798119 19798139 ESR1 JASPAR yes 27195168
chr1 19798126 19798131 SP1 TRANSFAC yes 27195170
chr1 19798129 19798133 LFA1 TRANSFAC yes 27195171
Genes associated with rs184480350[chr1:19798129], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More