EnhancerDB
  1. Home
  2. SNP
  3. rs184620028[chr1:39602589]
Enhancers that have rs184620028[chr1:39602589]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39588469 39628695 enh11759
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs184620028[chr1:39602589]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39602576 39602591 PRDM1 JASPAR yes 28256539
chr1 39602587 39602602 STAT1 JASPAR yes 28256540
chr1 39602589 39602600 STAT1 JASPAR yes 28256541
chr1 39602589 39602600 STAT3 JASPAR yes 28256542
Genes associated with rs184620028[chr1:39602589], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More