EnhancerDB
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  3. rs184661989[chr17:793988]
Enhancers that have rs184661989[chr17:793988]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 769365 796155 enh4193
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs184661989[chr17:793988]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 793977 793989 PKNOX2 JASPAR yes 52637755
chr17 793977 793989 TGIF1 JASPAR yes 52637756
chr17 793977 793989 TGIF2 JASPAR yes 52637757
chr17 793986 794000 GATA2 JASPAR yes 52637758
chr17 793988 793996 GATA3 JASPAR yes 52637759
chr17 793988 793996 GATA5 JASPAR yes 52637760
Genes associated with rs184661989[chr17:793988], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More