EnhancerDB
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  3. rs1852458[chr12:125219988]
Enhancers that have rs1852458[chr12:125219988]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs1852458[chr12:125219988]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125219661 125220115 ZNF274 GTRD no Blood (GM12878) 21582467
chr12 125219799 125220095 ZNF274 GTRD no Blood (GM12878) 21582468
chr12 125219982 125219999 NR3C1 JASPAR yes 124415388
chr12 125219982 125219999 NR3C2 JASPAR yes 124415389
chr12 125219984 125219999 AR JASPAR yes 124415390
Genes associated with rs1852458[chr12:125219988], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More