EnhancerDB
  1. Home
  2. SNP
  3. rs185297291[chr17:78627884]
Enhancers that have rs185297291[chr17:78627884]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78617185 78655235 enh4633
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs185297291[chr17:78627884]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78627873 78627885 PKNOX2 JASPAR yes 56263172
chr17 78627873 78627885 TGIF1 JASPAR yes 56263173
chr17 78627873 78627885 TGIF2 JASPAR yes 56263174
chr17 78627874 78627884 NEUROG2 JASPAR yes 56263175
Genes associated with rs185297291[chr17:78627884], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More