EnhancerDB
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  3. rs1853469[chr1:168433560]
Enhancers that have rs1853469[chr1:168433560]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 168433465 168471139 enh12354
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs1853469[chr1:168433560]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 168433552 168433563 YY2 JASPAR yes 32927370
chr1 168433556 168433566 GABPA JASPAR yes 32927371
chr1 168433558 168433564 ETS1 JASPAR yes 32927372
chr1 168433558 168433564 SPI1 JASPAR yes 32927373
chr1 168433558 168433572 SPIC JASPAR yes 32927374
Genes associated with rs1853469[chr1:168433560], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More