EnhancerDB
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  3. rs185399419[chr6:47116477]
Enhancers that have rs185399419[chr6:47116477]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 47092105 47126155 enh23288
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs185399419[chr6:47116477]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 47116458 47116478 RREB1 JASPAR yes 102004205
chr6 47116460 47116480 RREB1 JASPAR yes 102004206
chr6 47116462 47116482 RREB1 JASPAR yes 102004207
chr6 47116464 47116484 RREB1 JASPAR yes 102004208
chr6 47116465 47116477 FOXI1 JASPAR yes 102004210
chr6 47116465 47116480 FOXP1 JASPAR yes 102004211
chr6 47116465 47116485 RREB1 JASPAR yes 102004212
chr6 47116468 47116488 RREB1 JASPAR yes 102004213
chr6 47116469 47116489 RREB1 JASPAR yes 102004214
chr6 47116472 47116484 FOXI1 JASPAR yes 102004215
chr6 47116475 47116490 FOXA1 JASPAR yes 102004216
chr6 47116476 47116488 FOXI1 JASPAR yes 102004217
chr6 47116476 47116491 FOXP1 JASPAR yes 102004218
chr6 47116477 47116489 FOXC2 JASPAR yes 102004219
Genes associated with rs185399419[chr6:47116477], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More