EnhancerDB
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  3. rs185520472[chr11:122555550]
Enhancers that have rs185520472[chr11:122555550]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 122527985 122597555 enh2064
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs185520472[chr11:122555550]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 122555539 122555552 NFKB1 JASPAR yes 42019012
chr11 122555544 122555550 ZNF354C JASPAR yes 42019013
chr11 122555549 122555563 PLAG1 JASPAR yes 42019014
Genes associated with rs185520472[chr11:122555550], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More