EnhancerDB
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  3. rs185548731[chr17:65477771]
Enhancers that have rs185548731[chr17:65477771]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65460484 65480775 enh32309
Astrocyte Colon (HCT116) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Kidney Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Spleen Muscle (Myotube) Lung Muscle (A673) Heart
chr17 65477756 65478333 vista25646
VISTA
Transcript factors that have rs185548731[chr17:65477771]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65477766 65477777 HOXC13 JASPAR yes 21279927
chr17 65477766 65477777 HOXD12 JASPAR yes 21279928
chr17 65477766 65477777 HOXC13 JASPAR yes 55509802
chr17 65477766 65477777 HOXD12 JASPAR yes 55509803
chr17 65477769 65477783 IRF7 JASPAR yes 21279929
chr17 65477769 65477783 IRF7 JASPAR yes 55509804
Genes associated with rs185548731[chr17:65477771], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More