EnhancerDB
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  3. rs185642080[chr12:109062855]
Enhancers that have rs185642080[chr12:109062855]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 109055765 109067015 enh2584
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs185642080[chr12:109062855]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 109062845 109062859 RORA JASPAR yes 123611061
chr12 109062850 109062865 FOXA1 JASPAR yes 123611062
chr12 109062851 109062862 FOXB1 JASPAR yes 123611063
chr12 109062851 109062862 FOXC1 JASPAR yes 123611064
chr12 109062851 109062863 FOXC2 JASPAR yes 123611065
Genes associated with rs185642080[chr12:109062855], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More