EnhancerDB
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  3. rs185780461[chr5:159600856]
Enhancers that have rs185780461[chr5:159600856]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 159580425 159605208 enh22765
Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs185780461[chr5:159600856]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 159600845 159600856 FOSL2 JASPAR yes 67346559
chr5 159600847 159600860 SMAD2 JASPAR yes 67346560
chr5 159600850 159600860 TBR1 JASPAR yes 67346561
chr5 159600851 159600861 TBX21 JASPAR yes 67346562
chr5 159600852 159600860 MGA JASPAR yes 67346563
chr5 159600852 159600860 TBX15 JASPAR yes 67346564
chr5 159600852 159600860 TBX1 JASPAR yes 67346565
chr5 159600852 159600860 TBX4 JASPAR yes 67346566
chr5 159600852 159600860 TBX5 JASPAR yes 67346567
chr5 159600852 159600861 ZEB1 JASPAR yes 67346568
chr5 159600852 159600864 PKNOX1 JASPAR yes 67346569
chr5 159600852 159600864 TGIF1 JASPAR yes 67346570
chr5 159600852 159600865 ZBTB18 JASPAR yes 67346571
chr5 159600853 159600863 FIGLA JASPAR yes 67346572
chr5 159600853 159600863 ID4 JASPAR yes 67346573
chr5 159600853 159600863 TCF3 JASPAR yes 67346574
chr5 159600853 159600863 TCF4 JASPAR yes 67346575
chr5 159600854 159600863 SNAI2 JASPAR yes 67346576
chr5 159600855 159600860 USF2 TRANSFAC yes 67346577
Genes associated with rs185780461[chr5:159600856], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More