EnhancerDB
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  3. rs185874235[chr1:19776293]
Enhancers that have rs185874235[chr1:19776293]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs185874235[chr1:19776293]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19776276 19776297 IRF1 JASPAR yes 27191843
chr1 19776277 19776298 IRF1 JASPAR yes 27191845
chr1 19776278 19776293 FOXP1 JASPAR yes 27191846
chr1 19776278 19776299 IRF1 JASPAR yes 27191847
chr1 19776279 19776294 FOXP1 JASPAR yes 27191848
chr1 19776279 19776300 IRF1 JASPAR yes 27191849
chr1 19776280 19776295 FOXP1 JASPAR yes 27191850
chr1 19776281 19776302 IRF1 JASPAR yes 27191851
chr1 19776282 19776297 FOXP1 JASPAR yes 27191852
chr1 19776283 19776298 STAT2 JASPAR yes 27191853
chr1 19776283 19776304 IRF1 JASPAR yes 27191854
chr1 19776284 19776299 FOXP1 JASPAR yes 27191855
chr1 19776285 19776306 IRF1 JASPAR yes 27191856
chr1 19776289 19776304 PRDM1 JASPAR yes 27191857
chr1 19776292 19776305 SMAD2 JASPAR yes 27191858
Genes associated with rs185874235[chr1:19776293], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More