EnhancerDB
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  3. rs186062573[chr16:25005560]
Enhancers that have rs186062573[chr16:25005560]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 24992965 25014102 enh3954
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs186062573[chr16:25005560]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 25005103 25006217 ZNF274 GTRD no Blood (GM12878) 108189408
chr16 25005141 25007271 ZNF274 GTRD no Bone Marrow (K562) 21699251
chr16 25005141 25007271 ZNF274 GTRD no Bone Marrow (K562) 108189409
chr16 25005198 25006367 ZNF274 GTRD no Bone Marrow (K562) 21699252
chr16 25005198 25006367 ZNF274 GTRD no Bone Marrow (K562) 108189410
chr16 25005208 25006245 ZNF274 GTRD no Cervix (HeLa-S3) 21699253
chr16 25005208 25006245 ZNF274 GTRD no Cervix (HeLa-S3) 108189411
chr16 25005214 25005942 ZNF274 GTRD no Blood (GM12878) 108189412
chr16 25005307 25007427 TEF1 GTRD no Bone (Osteoblast) 21699254
chr16 25005307 25007427 TEF1 GTRD no Bone (Osteoblast) 108189413
chr16 25005320 25005835 ZNF274 GTRD no Blood (GM12878) 108189414
chr16 25005379 25005724 ZNF274 GTRD no Blood (GM12878) 108189415
chr16 25005397 25006182 P63 GTRD no Skin (Keratinocyte) 21699255
chr16 25005397 25006182 P63 GTRD no Skin (Keratinocyte) 108189416
chr16 25005442 25006174 ZNF274 GTRD no Blood (GM12878) 108189417
chr16 25005445 25006289 ZBTB33 GTRD no Lung (A549) 108189418
chr16 25005455 25005772 ZNF274 GTRD no Blood (GM12878) 108189419
chr16 25005455 25006361 ZNF274 GTRD no Bone Marrow (K562) 21699256
chr16 25005455 25006361 ZNF274 GTRD no Bone Marrow (K562) 108189420
chr16 25005483 25006133 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21699257
chr16 25005483 25006133 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108189421
chr16 25005488 25006028 EP300 UCSC Txn Factor no Conserved 108189422
chr16 25005488 25006028 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108189423
chr16 25005488 25006104 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21699258
chr16 25005488 25006104 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108189424
chr16 25005491 25006035 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21699259
chr16 25005491 25006035 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108189425
chr16 25005510 25006222 ZNF274 GTRD no Cervix (HeLa-S3) 21699260
chr16 25005510 25006222 ZNF274 GTRD no Cervix (HeLa-S3) 108189426
chr16 25005516 25005960 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21699261
chr16 25005516 25005960 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108189427
chr16 25005525 25005965 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21699262
chr16 25005525 25005965 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108189428
chr16 25005535 25006209 ZNF274 GTRD no Cervix (HeLa-S3) 21699263
chr16 25005535 25006209 ZNF274 GTRD no Cervix (HeLa-S3) 108189429
chr16 25005542 25006256 ZNF143 GTRD no Epithelial (MCF-7) 21699264
chr16 25005542 25006256 ZNF143 GTRD no Epithelial (MCF-7) 108189430
chr16 25005543 25006263 ZNF274 GTRD no Bone Marrow (K562) 21699265
chr16 25005543 25006263 ZNF274 GTRD no Bone Marrow (K562) 108189431
chr16 25005560 25005574 TCF7L2 JASPAR yes 10093430
chr16 25005560 25005575 LEF1 JASPAR yes 10093431
chr16 25005560 25006130 ZNF274 GTRD no Cervix (HeLa-S3) 21699266
chr16 25005560 25006130 ZNF274 GTRD no Cervix (HeLa-S3) 108189432
Genes associated with rs186062573[chr16:25005560], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More