EnhancerDB
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  3. rs186397654[chr1:27865185]
Enhancers that have rs186397654[chr1:27865185]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27859909 27873735 enh11667
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Heart
Transcript factors that have rs186397654[chr1:27865185]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27865178 27865186 TBX5 JASPAR yes 27706660
chr1 27865178 27865187 ZEB1 JASPAR yes 27706661
chr1 27865178 27865191 ZBTB18 JASPAR yes 27706662
chr1 27865179 27865189 ID4 JASPAR yes 27706663
chr1 27865179 27865189 TCF3 JASPAR yes 27706664
chr1 27865179 27865189 TCF4 JASPAR yes 27706665
chr1 27865181 27865186 USF2 TRANSFAC yes 27706666
Genes associated with rs186397654[chr1:27865185], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More