EnhancerDB
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  3. rs186506811[chr6:16712723]
Enhancers that have rs186506811[chr6:16712723]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 16667585 16734115 enh23080
Liver Astrocyte Colon (HCT116) Adrenal Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr6 16712557 16713382 vista51170
VISTA
Transcript factors that have rs186506811[chr6:16712723]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 16712575 16712854 RUNX3 UCSC Txn Factor no Conserved 108538902
chr6 16712719 16712733 SPIC JASPAR yes 70326839
chr6 16712719 16712733 SPIC JASPAR yes 100331586
chr6 16712720 16712733 ELF1 JASPAR yes 70326840
chr6 16712720 16712733 ELF1 JASPAR yes 100331587
chr6 16712723 16712733 GABPA JASPAR yes 70326841
chr6 16712723 16712733 GABPA JASPAR yes 100331588
Genes associated with rs186506811[chr6:16712723], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More