EnhancerDB
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  3. rs186553385[chr17:55560031]
Enhancers that have rs186553385[chr17:55560031]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55530146 55569915 enh4488
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs186553385[chr17:55560031]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55560020 55560032 GLI2 JASPAR yes 54960020
chr17 55560020 55560032 ZBTB7B JASPAR yes 54960021
chr17 55560020 55560032 ZBTB7C JASPAR yes 54960022
chr17 55560021 55560033 ZBTB7A JASPAR yes 54960023
chr17 55560028 55560049 ZNF263 JASPAR yes 54960025
chr17 55560030 55560038 EHF JASPAR yes 54960026
Genes associated with rs186553385[chr17:55560031], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More