EnhancerDB
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  3. rs186554447[chr1:27872620]
Enhancers that have rs186554447[chr1:27872620]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27859909 27873735 enh11667
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Heart
Transcript factors that have rs186554447[chr1:27872620]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27872608 27872622 STAT1 JASPAR yes 27707843
chr1 27872608 27872623 PRDM1 JASPAR yes 27707844
chr1 27872608 27872623 STAT2 JASPAR yes 27707845
chr1 27872613 27872624 NFKB1 JASPAR yes 27707846
chr1 27872614 27872629 HSF1 JASPAR yes 27707847
chr1 27872619 27872635 ZNF143 JASPAR yes 27707848
Genes associated with rs186554447[chr1:27872620], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More