EnhancerDB
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  3. rs186572099[chr17:55987843]
Enhancers that have rs186572099[chr17:55987843]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55982093 56031480 enh4496
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs186572099[chr17:55987843]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55987833 55987844 TFAP2A JASPAR yes 54997939
chr17 55987833 55987844 TFAP2B JASPAR yes 54997940
chr17 55987833 55987844 TFAP2C JASPAR yes 54997941
chr17 55987834 55987843 TFAP2A JASPAR yes 54997942
chr17 55987838 55987844 SP1 TRANSFAC yes 54997943
chr17 55987839 55987844 SP1 TRANSFAC yes 54997944
chr17 55987840 55987845 SP1 TRANSFAC yes 54997945
chr17 55987840 55987846 SP1 TRANSFAC yes 54997946
Genes associated with rs186572099[chr17:55987843], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More