EnhancerDB
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  3. rs186729927[chr1:16205282]
Enhancers that have rs186729927[chr1:16205282]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16203705 16215635 enh81
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs186729927[chr1:16205282]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16204564 16209335 TCF7L2 GTRD no Colon (HCT116) 21325255
chr1 16204564 16209335 TCF7L2 GTRD no Colon (HCT116) 107802203
chr1 16205272 16205282 ID4 JASPAR yes 27009604
chr1 16205275 16205288 NFKB1 JASPAR yes 27009605
chr1 16205277 16205283 ZNF354C JASPAR yes 27009606
chr1 16205280 16205291 USF1 JASPAR yes 27009607
chr1 16205280 16205291 USF2 JASPAR yes 27009608
chr1 16205281 16205291 SREBF2 JASPAR yes 27009609
chr1 16205282 16205297 TFAP2A JASPAR yes 27009610
Genes associated with rs186729927[chr1:16205282], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More