EnhancerDB
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  3. rs186731316[chr1:230289365]
Enhancers that have rs186731316[chr1:230289365]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 230237385 230313644 enh12770
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs186731316[chr1:230289365]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 230287538 230289779 ZNF274 GTRD no Bone Marrow (K562) 21391558
chr1 230287538 230289779 ZNF274 GTRD no Bone Marrow (K562) 107878789
chr1 230288643 230289893 TCF7L2 GTRD no Colon (HCT116) 21391559
chr1 230288643 230289893 TCF7L2 GTRD no Colon (HCT116) 107878790
chr1 230289351 230289367 NFYA JASPAR yes 36027370
chr1 230289352 230289370 NFYA JASPAR yes 36027371
chr1 230289353 230289365 PBX1 JASPAR yes 36027372
Genes associated with rs186731316[chr1:230289365], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More