EnhancerDB
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  3. rs186948491[chr12:52509679]
Enhancers that have rs186948491[chr12:52509679]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52508085 52522855 enh2356
Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Spleen Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs186948491[chr12:52509679]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52509631 52509874 ZNF143 GTRD no Epithelial (MCF-7) 21546109
chr12 52509670 52509681 SPDEF JASPAR yes 120918054
chr12 52509677 52509684 SP1 TRANSFAC yes 120918056
chr12 52509677 52509687 SP1 JASPAR yes 120918057
chr12 52509678 52509686 SP1 TRANSFAC yes 120918058
chr12 52509678 52509695 RXRA JASPAR yes 120918059
chr12 52509679 52509684 SP1 TRANSFAC yes 120918060
Genes associated with rs186948491[chr12:52509679], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More