EnhancerDB
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  3. rs186988879[chr6:29934954]
Enhancers that have rs186988879[chr6:29934954]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 29930235 29938316 enh9028
Liver Astrocyte Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs186988879[chr6:29934954]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 29934949 29934954 SP1 TRANSFAC yes 101018901
chr6 29934950 29934955 SP1 TRANSFAC yes 101018902
Genes associated with rs186988879[chr6:29934954], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More