EnhancerDB
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  3. rs187086779[chr12:109085217]
Enhancers that have rs187086779[chr12:109085217]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 109075725 109093399 enh14973
Bone Marrow (K562) Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs187086779[chr12:109085217]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 109084686 109085997 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21571458
chr12 109084686 109085997 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108057214
chr12 109084686 109086300 POLR2A UCSC Txn Factor no Conserved 108057215
chr12 109084733 109085233 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21571460
chr12 109084733 109085233 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108057217
chr12 109084789 109085405 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21571461
chr12 109084789 109085405 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108057218
chr12 109084916 109085472 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21571467
chr12 109084916 109085472 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108057224
chr12 109084968 109085592 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21571468
chr12 109084968 109085592 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108057225
chr12 109084991 109085607 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21571469
chr12 109084991 109085607 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108057226
chr12 109085207 109085222 FOXP1 JASPAR yes 123613346
Genes associated with rs187086779[chr12:109085217], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More